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An ML cgSNP-based <t>phylogenetic</t> tree, STs, serotype, sizes of tet (X)-positive plasmids, and resistant genotype and phenotype. The phylogenetic tree is built based on the strains of this study. All strains are grouped into three SNP clusters based on their cgSNP. Leaf names labeled in red designate tet (X)-negative strains, and names in black indicate tet (X)-positive strains. Bootstrap values are shown as circles. Branch lengths are displayed as numbers on each branch of this tree.
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An ML cgSNP-based <t>phylogenetic</t> tree, STs, serotype, sizes of tet (X)-positive plasmids, and resistant genotype and phenotype. The phylogenetic tree is built based on the strains of this study. All strains are grouped into three SNP clusters based on their cgSNP. Leaf names labeled in red designate tet (X)-negative strains, and names in black indicate tet (X)-positive strains. Bootstrap values are shown as circles. Branch lengths are displayed as numbers on each branch of this tree.
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An ML cgSNP-based <t>phylogenetic</t> tree, STs, serotype, sizes of tet (X)-positive plasmids, and resistant genotype and phenotype. The phylogenetic tree is built based on the strains of this study. All strains are grouped into three SNP clusters based on their cgSNP. Leaf names labeled in red designate tet (X)-negative strains, and names in black indicate tet (X)-positive strains. Bootstrap values are shown as circles. Branch lengths are displayed as numbers on each branch of this tree.
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Genome map of <t>B.pseudomallei</t> strain CM000152 generated using the CGView server. The blue arrow indicates CDSs, pink arrows represent tRNAs, dark green arrows represent rRNAs, black peaks represent G + C content, green peaks represent GC skew+, and the purple peaks represent GC skew-.
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Genome map of <t>B.pseudomallei</t> strain CM000152 generated using the CGView server. The blue arrow indicates CDSs, pink arrows represent tRNAs, dark green arrows represent rRNAs, black peaks represent G + C content, green peaks represent GC skew+, and the purple peaks represent GC skew-.
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Genome map of <t>B.pseudomallei</t> strain CM000152 generated using the CGView server. The blue arrow indicates CDSs, pink arrows represent tRNAs, dark green arrows represent rRNAs, black peaks represent G + C content, green peaks represent GC skew+, and the purple peaks represent GC skew-.
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Genome map of <t>B.pseudomallei</t> strain CM000152 generated using the CGView server. The blue arrow indicates CDSs, pink arrows represent tRNAs, dark green arrows represent rRNAs, black peaks represent G + C content, green peaks represent GC skew+, and the purple peaks represent GC skew-.
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Image Search Results


An ML cgSNP-based phylogenetic tree, STs, serotype, sizes of tet (X)-positive plasmids, and resistant genotype and phenotype. The phylogenetic tree is built based on the strains of this study. All strains are grouped into three SNP clusters based on their cgSNP. Leaf names labeled in red designate tet (X)-negative strains, and names in black indicate tet (X)-positive strains. Bootstrap values are shown as circles. Branch lengths are displayed as numbers on each branch of this tree.

Journal: Microbiology Spectrum

Article Title: Novel ST3871 Escherichia coli exhibits diverse transmission modes, carrying the tet (X4) resistance gene

doi: 10.1128/spectrum.00521-25

Figure Lengend Snippet: An ML cgSNP-based phylogenetic tree, STs, serotype, sizes of tet (X)-positive plasmids, and resistant genotype and phenotype. The phylogenetic tree is built based on the strains of this study. All strains are grouped into three SNP clusters based on their cgSNP. Leaf names labeled in red designate tet (X)-negative strains, and names in black indicate tet (X)-positive strains. Bootstrap values are shown as circles. Branch lengths are displayed as numbers on each branch of this tree.

Article Snippet: An ML circular phylogenetic tree based on cgSNP was built using the 95 tet (X)-positive E. coli strains containing 61 ST types retrieved from the National Center for Biotechnology Information (NCBI) database and the E. coli strains of this study (Fig. 3).

Techniques: Labeling

An ML cgSNP-based phylogenetic tree is built using the E. coli strains from the current study and the NCBI database. Bootstrap values are shown as circles. Branch lengths are displayed as numbers on each branch of this tree.

Journal: Microbiology Spectrum

Article Title: Novel ST3871 Escherichia coli exhibits diverse transmission modes, carrying the tet (X4) resistance gene

doi: 10.1128/spectrum.00521-25

Figure Lengend Snippet: An ML cgSNP-based phylogenetic tree is built using the E. coli strains from the current study and the NCBI database. Bootstrap values are shown as circles. Branch lengths are displayed as numbers on each branch of this tree.

Article Snippet: An ML circular phylogenetic tree based on cgSNP was built using the 95 tet (X)-positive E. coli strains containing 61 ST types retrieved from the National Center for Biotechnology Information (NCBI) database and the E. coli strains of this study (Fig. 3).

Techniques:

Genome map of B.pseudomallei strain CM000152 generated using the CGView server. The blue arrow indicates CDSs, pink arrows represent tRNAs, dark green arrows represent rRNAs, black peaks represent G + C content, green peaks represent GC skew+, and the purple peaks represent GC skew-.

Journal: Data in Brief

Article Title: Draft Genome Sequence data of Burkholderia pseudomallei CM000152 : A strain isolated from pus sample of an Indian patient

doi: 10.1016/j.dib.2025.111991

Figure Lengend Snippet: Genome map of B.pseudomallei strain CM000152 generated using the CGView server. The blue arrow indicates CDSs, pink arrows represent tRNAs, dark green arrows represent rRNAs, black peaks represent G + C content, green peaks represent GC skew+, and the purple peaks represent GC skew-.

Article Snippet: Our phylogenetic tree identified B. pseudomallei ATCC 23,343 as the nearest relative with 74 % bootstrap value ( ).

Techniques: Generated